Genome-Wide Identification and Characterization of SQUAMOSA-Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of Citrus Clementina.
Identifieur interne : 000938 ( Main/Exploration ); précédent : 000937; suivant : 000939Genome-Wide Identification and Characterization of SQUAMOSA-Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of Citrus Clementina.
Auteurs : Ren-Fang Zeng [République populaire de Chine] ; Jing-Jing Zhou [République populaire de Chine] ; Sheng-Rui Liu [République populaire de Chine] ; Zhi-Meng Gan [République populaire de Chine] ; Jin-Zhi Zhang [République populaire de Chine] ; Chun-Gen Hu [République populaire de Chine]Source :
- Biomolecules [ 2218-273X ] ; 2019.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Citrus, Facteurs de transcription, Fleurs, Protéines d'Arabidopsis, Régions promotrices (génétique).
- métabolisme : Facteurs de transcription, Protéines d'Arabidopsis.
- Phylogenèse.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : Arabidopsis Proteins, Transcription Factors.
- chemical , metabolism : Arabidopsis Proteins, Transcription Factors.
- genetics : Citrus, Flowers, Promoter Regions, Genetic.
- Phylogeny.
Abstract
SQUAMOSA-promoter binding protein (SBP)-box genes encode a family of plant-specific transcription factors that play vital roles in plant growth and development. In this study, 15 SBP-box genes were identified and isolated from Citrus clementina (CclSBPs), where 10 of these genes were predicted to be putative targets of Citrus clementina microRNA156 (CclmiR156). The 15 CclSBP genes could be classified into six groups based on phylogenetic analysis, diverse intron⁻exon structure, and motif prediction, similar to the SQUAMOSA promoter binding protein-like (SPL) gene family of Populus trichocarpa and Arabidopsis thaliana. Furthermore, CclSBPs classified into a group/subgroup have similar gene structures and conserved motifs, implying their functional redundancy. Tissue-specific expression analysis of CclSBPs demonstrated their diversified expression patterns. To further explore the potential role of CclSBPs during floral inductive water deficits, the dynamic changes of the 15 CclSBPs were investigated during floral inductive water deficits, and the results showed that some CclSBPs were associated with floral induction. Among these genes, CclSBP6 was not homologous to the Arabidopsis SBP-box gene family, and CclSBP7 was regulated by being alternatively spliced. Therefore, CclSBP6 and CclSBP7 were genetically transformed in Arabidopsis. Overexpression of the two genes changed the flowering time of Arabidopsis.
DOI: 10.3390/biom9020066
PubMed: 30769909
PubMed Central: PMC6407117
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-Wide Identification and Characterization of SQUAMOSA-Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of <i>Citrus Clementina</i>.</title><author><name sortKey="Zeng, Ren Fang" sort="Zeng, Ren Fang" uniqKey="Zeng R" first="Ren-Fang" last="Zeng">Ren-Fang Zeng</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. Renfzeng@webmail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Zhou, Jing Jing" sort="Zhou, Jing Jing" uniqKey="Zhou J" first="Jing-Jing" last="Zhou">Jing-Jing Zhou</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. hupodingxiangyu@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Liu, Sheng Rui" sort="Liu, Sheng Rui" uniqKey="Liu S" first="Sheng-Rui" last="Liu">Sheng-Rui Liu</name><affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230000, China. liushengrui@ahau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230000</wicri:regionArea><placeName><settlement type="city">Hefei</settlement><region type="province">Anhui</region></placeName></affiliation></author><author><name sortKey="Gan, Zhi Meng" sort="Gan, Zhi Meng" uniqKey="Gan Z" first="Zhi-Meng" last="Gan">Zhi-Meng Gan</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. zhimenggan@webmail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Zhang, Jin Zhi" sort="Zhang, Jin Zhi" uniqKey="Zhang J" first="Jin-Zhi" last="Zhang">Jin-Zhi Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. jinzhizhang@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Hu, Chun Gen" sort="Hu, Chun Gen" uniqKey="Hu C" first="Chun-Gen" last="Hu">Chun-Gen Hu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. chungen@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2019">2019</date><idno type="RBID">pubmed:30769909</idno><idno type="pmid">30769909</idno><idno type="doi">10.3390/biom9020066</idno><idno type="pmc">PMC6407117</idno><idno type="wicri:Area/Main/Corpus">000A30</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000A30</idno><idno type="wicri:Area/Main/Curation">000A30</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000A30</idno><idno type="wicri:Area/Main/Exploration">000A30</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genome-Wide Identification and Characterization of SQUAMOSA-Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of <i>Citrus Clementina</i>.</title><author><name sortKey="Zeng, Ren Fang" sort="Zeng, Ren Fang" uniqKey="Zeng R" first="Ren-Fang" last="Zeng">Ren-Fang Zeng</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. Renfzeng@webmail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Zhou, Jing Jing" sort="Zhou, Jing Jing" uniqKey="Zhou J" first="Jing-Jing" last="Zhou">Jing-Jing Zhou</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. hupodingxiangyu@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Liu, Sheng Rui" sort="Liu, Sheng Rui" uniqKey="Liu S" first="Sheng-Rui" last="Liu">Sheng-Rui Liu</name><affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230000, China. liushengrui@ahau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230000</wicri:regionArea><placeName><settlement type="city">Hefei</settlement><region type="province">Anhui</region></placeName></affiliation></author><author><name sortKey="Gan, Zhi Meng" sort="Gan, Zhi Meng" uniqKey="Gan Z" first="Zhi-Meng" last="Gan">Zhi-Meng Gan</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. zhimenggan@webmail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Zhang, Jin Zhi" sort="Zhang, Jin Zhi" uniqKey="Zhang J" first="Jin-Zhi" last="Zhang">Jin-Zhi Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. jinzhizhang@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Hu, Chun Gen" sort="Hu, Chun Gen" uniqKey="Hu C" first="Chun-Gen" last="Hu">Chun-Gen Hu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. chungen@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author></analytic><series><title level="j">Biomolecules</title><idno type="eISSN">2218-273X</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Arabidopsis Proteins (genetics)</term><term>Arabidopsis Proteins (metabolism)</term><term>Citrus (genetics)</term><term>Flowers (genetics)</term><term>Phylogeny (MeSH)</term><term>Promoter Regions, Genetic (genetics)</term><term>Transcription Factors (genetics)</term><term>Transcription Factors (metabolism)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Citrus (génétique)</term><term>Facteurs de transcription (génétique)</term><term>Facteurs de transcription (métabolisme)</term><term>Fleurs (génétique)</term><term>Phylogenèse (MeSH)</term><term>Protéines d'Arabidopsis (génétique)</term><term>Protéines d'Arabidopsis (métabolisme)</term><term>Régions promotrices (génétique) (génétique)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Arabidopsis Proteins</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Arabidopsis Proteins</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Citrus</term><term>Flowers</term><term>Promoter Regions, Genetic</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Citrus</term><term>Facteurs de transcription</term><term>Fleurs</term><term>Protéines d'Arabidopsis</term><term>Régions promotrices (génétique)</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Facteurs de transcription</term><term>Protéines d'Arabidopsis</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Phylogeny</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Phylogenèse</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">SQUAMOSA-promoter binding protein (SBP)-box genes encode a family of plant-specific transcription factors that play vital roles in plant growth and development. In this study, 15 SBP-box genes were identified and isolated from <i>Citrus clementina</i> (<i>CclSBPs</i>), where 10 of these genes were predicted to be putative targets of <i>Citrus clementina</i> microRNA156 (CclmiR156). The 15 <i>CclSBP</i> genes could be classified into six groups based on phylogenetic analysis, diverse intron⁻exon structure, and motif prediction, similar to the <i>SQUAMOSA promoter binding protein-like (SPL)</i> gene family of <i>Populus trichocarpa</i> and <i>Arabidopsis thaliana</i>. Furthermore, <i>CclSBPs</i> classified into a group/subgroup have similar gene structures and conserved motifs, implying their functional redundancy. Tissue-specific expression analysis of <i>CclSBPs</i> demonstrated their diversified expression patterns. To further explore the potential role of <i>CclSBPs</i> during floral inductive water deficits, the dynamic changes of the 15 <i>CclSBPs</i> were investigated during floral inductive water deficits, and the results showed that some <i>CclSBPs</i> were associated with floral induction. Among these genes, <i>CclSBP6</i> was not homologous to the <i>Arabidopsis</i> SBP-box gene family, and <i>CclSBP7</i> was regulated by being alternatively spliced. Therefore, <i>CclSBP6</i> and <i>CclSBP7</i> were genetically transformed in <i>Arabidopsis</i>. Overexpression of the two genes changed the flowering time of <i>Arabidopsis</i>.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30769909</PMID><DateCompleted><Year>2019</Year><Month>08</Month><Day>30</Day></DateCompleted><DateRevised><Year>2020</Year><Month>03</Month><Day>09</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2218-273X</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>2</Issue><PubDate><Year>2019</Year><Month>02</Month><Day>14</Day></PubDate></JournalIssue><Title>Biomolecules</Title><ISOAbbreviation>Biomolecules</ISOAbbreviation></Journal><ArticleTitle>Genome-Wide Identification and Characterization of SQUAMOSA-Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of <i>Citrus Clementina</i>.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E66</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/biom9020066</ELocationID><Abstract><AbstractText>SQUAMOSA-promoter binding protein (SBP)-box genes encode a family of plant-specific transcription factors that play vital roles in plant growth and development. In this study, 15 SBP-box genes were identified and isolated from <i>Citrus clementina</i> (<i>CclSBPs</i>), where 10 of these genes were predicted to be putative targets of <i>Citrus clementina</i> microRNA156 (CclmiR156). The 15 <i>CclSBP</i> genes could be classified into six groups based on phylogenetic analysis, diverse intron⁻exon structure, and motif prediction, similar to the <i>SQUAMOSA promoter binding protein-like (SPL)</i> gene family of <i>Populus trichocarpa</i> and <i>Arabidopsis thaliana</i>. Furthermore, <i>CclSBPs</i> classified into a group/subgroup have similar gene structures and conserved motifs, implying their functional redundancy. Tissue-specific expression analysis of <i>CclSBPs</i> demonstrated their diversified expression patterns. To further explore the potential role of <i>CclSBPs</i> during floral inductive water deficits, the dynamic changes of the 15 <i>CclSBPs</i> were investigated during floral inductive water deficits, and the results showed that some <i>CclSBPs</i> were associated with floral induction. Among these genes, <i>CclSBP6</i> was not homologous to the <i>Arabidopsis</i> SBP-box gene family, and <i>CclSBP7</i> was regulated by being alternatively spliced. Therefore, <i>CclSBP6</i> and <i>CclSBP7</i> were genetically transformed in <i>Arabidopsis</i>. Overexpression of the two genes changed the flowering time of <i>Arabidopsis</i>.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zeng</LastName><ForeName>Ren-Fang</ForeName><Initials>RF</Initials><AffiliationInfo><Affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. Renfzeng@webmail.hzau.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhou</LastName><ForeName>Jing-Jing</ForeName><Initials>JJ</Initials><AffiliationInfo><Affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. hupodingxiangyu@mail.hzau.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Sheng-Rui</ForeName><Initials>SR</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230000, China. liushengrui@ahau.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gan</LastName><ForeName>Zhi-Meng</ForeName><Initials>ZM</Initials><AffiliationInfo><Affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. zhimenggan@webmail.hzau.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Jin-Zhi</ForeName><Initials>JZ</Initials><AffiliationInfo><Affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. jinzhizhang@mail.hzau.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hu</LastName><ForeName>Chun-Gen</ForeName><Initials>CG</Initials><AffiliationInfo><Affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, China. chungen@mail.hzau.edu.cn.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>02</Month><Day>14</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Biomolecules</MedlineTA><NlmUniqueID>101596414</NlmUniqueID><ISSNLinking>2218-273X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D029681">Arabidopsis Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C587508">SQUAMOSA protein, Arabidopsis</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014157">Transcription Factors</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D029681" MajorTopicYN="N">Arabidopsis Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002957" MajorTopicYN="N">Citrus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D035264" MajorTopicYN="N">Flowers</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D011401" MajorTopicYN="N">Promoter Regions, Genetic</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014157" MajorTopicYN="N">Transcription Factors</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Citrus clementina</Keyword><Keyword MajorTopicYN="Y">SBP-box genes</Keyword><Keyword MajorTopicYN="Y">evolutionary comparison</Keyword><Keyword MajorTopicYN="Y">functional diversity</Keyword><Keyword MajorTopicYN="Y">gene expression</Keyword></KeywordList><CoiStatement>The authors declare no conflict of interest.</CoiStatement></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>12</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2019</Year><Month>02</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2019</Year><Month>02</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>2</Month><Day>17</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>2</Month><Day>17</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>8</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30769909</ArticleId><ArticleId IdType="pii">biom9020066</ArticleId><ArticleId IdType="doi">10.3390/biom9020066</ArticleId><ArticleId IdType="pmc">PMC6407117</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Plant Mol Biol. 2011 May;76(1-2):35-45</Citation><ArticleIdList><ArticleId IdType="pubmed">21373962</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2010 Jul;22(7):2322-35</Citation><ArticleIdList><ArticleId IdType="pubmed">20622149</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2001 Aug;11(8):1441-52</Citation><ArticleIdList><ArticleId IdType="pubmed">11483586</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol Biochem. 2013 Sep;70:100-14</Citation><ArticleIdList><ArticleId IdType="pubmed">23771035</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2006 Aug;38(8):948-52</Citation><ArticleIdList><ArticleId IdType="pubmed">16832354</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2014 Dec;26(12):4933-53</Citation><ArticleIdList><ArticleId IdType="pubmed">25516599</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2009 Jan;21(1):347-61</Citation><ArticleIdList><ArticleId IdType="pubmed">19122104</ArticleId></ArticleIdList></Reference><Reference><Citation>J Integr Plant Biol. 2010 Nov;52(11):946-51</Citation><ArticleIdList><ArticleId IdType="pubmed">20977652</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 1998 Dec;16(6):735-43</Citation><ArticleIdList><ArticleId IdType="pubmed">10069079</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2005 Mar;41(5):744-54</Citation><ArticleIdList><ArticleId IdType="pubmed">15703061</ArticleId></ArticleIdList></Reference><Reference><Citation>Gene. 2008 Jul 15;418(1-2):1-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18495384</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Biotechnol. 2014 Jul;32(7):656-62</Citation><ArticleIdList><ArticleId IdType="pubmed">24908277</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Gen Genet. 1996 Jan 15;250(1):7-16</Citation><ArticleIdList><ArticleId IdType="pubmed">8569690</ArticleId></ArticleIdList></Reference><Reference><Citation>OMICS. 2012 May;16(5):284-7</Citation><ArticleIdList><ArticleId IdType="pubmed">22455463</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2012 Jun;235(6):1171-84</Citation><ArticleIdList><ArticleId IdType="pubmed">22160465</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(8):e43760</Citation><ArticleIdList><ArticleId IdType="pubmed">22952759</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2014 May 15;14:131</Citation><ArticleIdList><ArticleId IdType="pubmed">24884654</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2001 Jan 1;29(1):102-5</Citation><ArticleIdList><ArticleId IdType="pubmed">11125061</ArticleId></ArticleIdList></Reference><Reference><Citation>Yi Chuan. 2007 Aug;29(8):1023-6</Citation><ArticleIdList><ArticleId IdType="pubmed">17681935</ArticleId></ArticleIdList></Reference><Reference><Citation>Development. 2006 Sep;133(18):3539-47</Citation><ArticleIdList><ArticleId IdType="pubmed">16914499</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 1999 Jan 15;27(2):573-80</Citation><ArticleIdList><ArticleId IdType="pubmed">9862982</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2003 Apr;15(4):1009-19</Citation><ArticleIdList><ArticleId IdType="pubmed">12671094</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2006 Sep;142(1):280-93</Citation><ArticleIdList><ArticleId IdType="pubmed">16861571</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Physiol. 2009 Dec;50(12):2133-45</Citation><ArticleIdList><ArticleId IdType="pubmed">19880401</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W369-73</Citation><ArticleIdList><ArticleId IdType="pubmed">16845028</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2008 May;67(1-2):183-95</Citation><ArticleIdList><ArticleId IdType="pubmed">18278578</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2011 Jul;39(Web Server issue):W155-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21622958</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2008 Dec;229(1):99-113</Citation><ArticleIdList><ArticleId IdType="pubmed">18800226</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2003 Nov;13(11):2498-504</Citation><ArticleIdList><ArticleId IdType="pubmed">14597658</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2010 Dec;22(12):3935-50</Citation><ArticleIdList><ArticleId IdType="pubmed">21177480</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2017 Feb 24;7:43226</Citation><ArticleIdList><ArticleId IdType="pubmed">28233798</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2014 Jan;42(Database issue):D222-30</Citation><ArticleIdList><ArticleId IdType="pubmed">24288371</ArticleId></ArticleIdList></Reference><Reference><Citation>Development. 2010 Apr;137(8):1243-50</Citation><ArticleIdList><ArticleId IdType="pubmed">20223762</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2000 Nov;16(11):1040-1</Citation><ArticleIdList><ArticleId IdType="pubmed">11159316</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2013 Dec;30(12):2725-9</Citation><ArticleIdList><ArticleId IdType="pubmed">24132122</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2013 Jul 15;29(14):1830-1</Citation><ArticleIdList><ArticleId IdType="pubmed">23740750</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2004 Jun;14(6):1188-90</Citation><ArticleIdList><ArticleId IdType="pubmed">15173120</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2018 May 25;69(12):2979-2993</Citation><ArticleIdList><ArticleId IdType="pubmed">29659948</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18730-5</Citation><ArticleIdList><ArticleId IdType="pubmed">16352720</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2008 Apr;146(4):1687-96</Citation><ArticleIdList><ArticleId IdType="pubmed">18258690</ArticleId></ArticleIdList></Reference><Reference><Citation>Physiol Plant. 2004 Mar;120(3):491-500</Citation><ArticleIdList><ArticleId IdType="pubmed">15032847</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protoc Bioinformatics. 2002 Aug;Chapter 2:Unit 2.3</Citation><ArticleIdList><ArticleId IdType="pubmed">18792934</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2012 Jun 24;44(8):950-4</Citation><ArticleIdList><ArticleId IdType="pubmed">22729225</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 2004 Mar 12;337(1):49-63</Citation><ArticleIdList><ArticleId IdType="pubmed">15001351</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2017 Jun 13;8:1013</Citation><ArticleIdList><ArticleId IdType="pubmed">28659956</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2007 Feb;63(3):429-39</Citation><ArticleIdList><ArticleId IdType="pubmed">17093870</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Genet Genomics. 2014 Oct;289(5):855-72</Citation><ArticleIdList><ArticleId IdType="pubmed">24820208</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2013 Jan;45(1):59-66</Citation><ArticleIdList><ArticleId IdType="pubmed">23179022</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 2005 Sep 23;352(3):585-96</Citation><ArticleIdList><ArticleId IdType="pubmed">16095614</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013;8(3):e59358</Citation><ArticleIdList><ArticleId IdType="pubmed">23527172</ArticleId></ArticleIdList></Reference><Reference><Citation>Gene. 1999 Sep 3;237(1):91-104</Citation><ArticleIdList><ArticleId IdType="pubmed">10524240</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2005 Aug 4;436(7051):714-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16079849</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2009 Aug 21;138(4):738-49</Citation><ArticleIdList><ArticleId IdType="pubmed">19703399</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2010 Jun;42(6):541-4</Citation><ArticleIdList><ArticleId IdType="pubmed">20495565</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2002 Jan 1;30(1):325-7</Citation><ArticleIdList><ArticleId IdType="pubmed">11752327</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2008 Jan;227(2):505-15</Citation><ArticleIdList><ArticleId IdType="pubmed">17989994</ArticleId></ArticleIdList></Reference><Reference><Citation>Dev Cell. 2005 Apr;8(4):517-27</Citation><ArticleIdList><ArticleId IdType="pubmed">15809034</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Pathog. 2013 Mar;9(3):e1003235</Citation><ArticleIdList><ArticleId IdType="pubmed">23516366</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2015 Jan;43(Database issue):D257-60</Citation><ArticleIdList><ArticleId IdType="pubmed">25300481</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2015 May 27;6:389</Citation><ArticleIdList><ArticleId IdType="pubmed">26074947</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country><region><li>Anhui</li><li>Hubei</li></region><settlement><li>Hefei</li><li>Wuhan</li></settlement></list><tree><country name="République populaire de Chine"><region name="Hubei"><name sortKey="Zeng, Ren Fang" sort="Zeng, Ren Fang" uniqKey="Zeng R" first="Ren-Fang" last="Zeng">Ren-Fang Zeng</name></region><name sortKey="Gan, Zhi Meng" sort="Gan, Zhi Meng" uniqKey="Gan Z" first="Zhi-Meng" last="Gan">Zhi-Meng Gan</name><name sortKey="Hu, Chun Gen" sort="Hu, Chun Gen" uniqKey="Hu C" first="Chun-Gen" last="Hu">Chun-Gen Hu</name><name sortKey="Liu, Sheng Rui" sort="Liu, Sheng Rui" uniqKey="Liu S" first="Sheng-Rui" last="Liu">Sheng-Rui Liu</name><name sortKey="Zhang, Jin Zhi" sort="Zhang, Jin Zhi" uniqKey="Zhang J" first="Jin-Zhi" last="Zhang">Jin-Zhi Zhang</name><name sortKey="Zhou, Jing Jing" sort="Zhou, Jing Jing" uniqKey="Zhou J" first="Jing-Jing" last="Zhou">Jing-Jing Zhou</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000938 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000938 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:30769909
|texte= Genome-Wide Identification and Characterization of SQUAMOSA-Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of Citrus Clementina.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:30769909" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
| This area was generated with Dilib version V0.6.37. |  |